Transcript: ENST00000376752.4 PCSK5-001

Description

proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:8747]

Gene Synonyms

PC5, PC6, PC6A, SPC6, subtilase

Location

Chromosome 9: 78,505,621-78,810,805 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 34 domains and features, is associated with 128966 variant alleles and maps to 800 oligo probes.

Gene

This transcript is a product of gene ENSG00000099139.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545128.1	PCSK5-201	9538	1860aa	ENSP00000446280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55320	I0EZ71 Q92824	NM_001190482.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376752.4	PCSK5-001	5756	913aa	ENSP00000365943.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6652	I0EZ71 Q92824	NM_006200.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424854.2	PCSK5-002	4731	1560aa	ENSP00000411654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I0EZ71 Q5JSG7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376767.3	PCSK5-003	2845	690aa	ENSP00000365958.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMG5 I0EZ71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455778.1	PCSK5-004	503	101aa	ENSP00000407239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMG8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 5,756 bps, Translation length: 913 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92824

CCDS

This transcript is a member of the Human CCDS set: CCDS6652

Version

ENST00000376752.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052716 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000376752.4 PCSK5-001

Summary