Transcript: ENST00000356667.4 PGC-003

Description

progastricsin (pepsinogen C) [Source:HGNC Symbol;Acc:8890]

Gene Synonyms

PEPC, PGII

Location

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 3289 variant alleles and maps to 179 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373025.3	PGC-001	1371	388aa	ENSP00000362116.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4859	P20142	NM_002630.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425343.2	PGC-201	1152	315aa	ENSP00000405094.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55000	P20142	NM_001166424.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356667.4	PGC-003	480	139aa	ENSP00000349094.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415707.1	PGC-004	399	86aa	ENSP00000399429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3L9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 480 bps, Translation length: 139 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000356667.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000145703 (version 3)