Transcript: ENST00000426608.1 PTGS1-003

Description

prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) [Source:HGNC Symbol;Acc:9604]

Gene Synonyms

COX1, COX3, PCOX1, PES-1, PGG/HS, PGHS-1, PGHS1, PHS1, PTGHS

Location

Chromosome 9: 125,133,467-125,145,811 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 5664 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSG00000095303.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000362012.2	PTGS1-001	4964	599aa	ENSP00000354612.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6842	P23219	NM_080591.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000223423.4	PTGS1-002	2328	562aa	ENSP00000223423.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6843	P23219	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540753.1	PTGS1-202	2312	537aa	ENSP00000437709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59520	P23219	NM_001271368.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373698.5	PTGS1-201	2073	490aa	ENSP00000362802.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59521	-	NM_001271165.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426608.1	PTGS1-003	468	156aa	ENSP00000411606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 468 bps, Translation length: 156 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000426608.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053935 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000426608.1 PTGS1-003

Summary