Transcript: ENST00000207870.3 XYLB-001

Description

xylulokinase homolog (H. influenzae) [Source:HGNC Symbol;Acc:12839]

Gene Synonyms

FLJ10343, FLJ12539

Location

Chromosome 3: 38,388,270-38,456,467 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 9 domains and features, is associated with 29038 variant alleles and maps to 643 oligo probes.

Gene

This transcript is a product of gene ENSG00000093217.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000207870.3	XYLB-001	3664	536aa	ENSP00000207870.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2678	B3KM56 B4DDT2 O75191	NM_005108.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542835.1	XYLB-201	1737	399aa	ENSP00000443659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KM56 B4DDT2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427323.1	XYLB-003	1666	66aa	ENSP00000412282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0N9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424034.1	XYLB-002	3484	61aa	ENSP00000398845.1	Nonsense mediated decay		F8WBF6	-	-
ENST00000472721.1	XYLB-006	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487569.1	XYLB-005	365	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,664 bps, Translation length: 536 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75191

CCDS

This transcript is a member of the Human CCDS set: CCDS2678

Version

ENST00000207870.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254062 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000207870.3 XYLB-001

Summary