Transcript: ENST00000251195.5 CLSPN-001

Description

claspin [Source:HGNC Symbol;Acc:19715]

Location

Chromosome 1: 36,185,819-36,235,568 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 13 domains and features, is associated with 20689 variant alleles and maps to 688 oligo probes.

Gene

This transcript is a product of gene ENSG00000092853.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318121.3	CLSPN-005	4169	1339aa	ENSP00000312995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS396	Q9HAW4	NM_022111.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251195.5	CLSPN-001	4769	1332aa	ENSP00000251195.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HAW4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520551.1	CLSPN-004	4010	1286aa	ENSP00000428848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESG2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373220.3	CLSPN-003	3977	1275aa	ENSP00000362317.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53297	Q9HAW4	NM_001190481.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466308.1	CLSPN-002	717	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517467.1	CLSPN-006	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,769 bps, Translation length: 1,332 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HAW4

Version

ENST00000251195.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000012014 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000251195.5 CLSPN-001

Summary