Transcript: ENST00000439685.2 CCDC80-003

Description

coiled-coil domain containing 80 [Source:HGNC Symbol;Acc:30649]

Gene Synonyms

DRO1, SSG1, URB, okuribin

Location

Chromosome 3: 112,323,948-112,360,147 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 15 domains and features, is associated with 15656 variant alleles and maps to 584 oligo probes.

Gene

This transcript is a product of gene ENSG00000091986.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000206423.3	CCDC80-001	4664	950aa	ENSP00000206423.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2968	Q76M96	NM_199512.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439685.2	CCDC80-003	3557	950aa	ENSP00000411814.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2968	Q76M96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461431.1	CCDC80-007	781	261aa	ENSP00000420123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000479368.1	CCDC80-006	681	212aa	ENSP00000418188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8I6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475181.1	CCDC80-012	1010	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480275.1	CCDC80-009	684	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469554.1	CCDC80-011	626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473959.1	CCDC80-010	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 3,557 bps, Translation length: 950 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q76M96

CCDS

This transcript is a member of the Human CCDS set: CCDS2968

Version

ENST00000439685.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000354221 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000439685.2 CCDC80-003

Summary