Transcript: ENST00000011292.3 CPA1-001

Description

carboxypeptidase A1 (pancreatic) [Source:HGNC Symbol;Acc:2296]

Gene Synonyms

CPA

Location

Chromosome 7: 130,020,212-130,027,929 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 3891 variant alleles and maps to 490 oligo probes.

Gene

This transcript is a product of gene ENSG00000091704.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000011292.3	CPA1-001	1487	419aa	ENSP00000011292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5820	C9JQ63 C9JUF9 C9JUZ4 P15085	NM_001868.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484324.1	CPA1-003	1303	331aa	ENSP00000419497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQ63 C9JUF9 C9JUZ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476062.1	CPA1-007	1062	269aa	ENSP00000419408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQ63 C9JUZ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481342.1	CPA1-005	581	103aa	ENSP00000420218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQ63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000604896.1	CPA1-010	573	191aa	ENSP00000475021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R433	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000479106.1	CPA1-004	1931	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491460.1	CPA1-002	1063	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478096.1	CPA1-009	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470838.1	CPA1-008	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,487 bps, Translation length: 419 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15085

CCDS

This transcript is a member of the Human CCDS set: CCDS5820

Version

ENST00000011292.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000349736 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000011292.3 CPA1-001

Summary