Transcript: ENST00000562100.1 PDPR-006

Description

pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:30264]

Gene Synonyms

KIAA1990, PDP3

Location

Chromosome 16: 70,165,836-70,190,762 forward strand.

About this transcript

This transcript has 11 exons, is associated with 16291 variant alleles and maps to 562 oligo probes.

Gene

This transcript is a product of gene ENSG00000090857.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288050.4	PDPR-001	7999	879aa	ENSP00000288050.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45520	A8MT40 B3KSE1 B7ZAR9 H3BU60 H3BV59 Q8NCN5	NM_017990.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568530.1	PDPR-005	7223	879aa	ENSP00000457916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45520	A8MT40 B3KSE1 B7ZAR9 H3BU60 H3BV59 Q8NCN5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398122.3	PDPR-003	2734	779aa	ENSP00000381190.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MT40 B3KSE1 B7ZAR9 H3BU60 H3BV59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542659.1	PDPR-201	2381	224aa	ENSP00000441690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSE1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567046.1	PDPR-007	1207	237aa	ENSP00000456959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSE1 B7ZAR9 H3BU60 H3BV59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567896.1	PDPR-011	690	100aa	ENSP00000457484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU60	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569042.1	PDPR-010	598	197aa	ENSP00000457636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU60 H3BUH3 H3BV59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563930.1	PDPR-009	551	149aa	ENSP00000457961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU60 H3BV59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565186.1	PDPR-004	4353	491aa	ENSP00000455764.1	Nonsense mediated decay		H3BQG3	-	-
ENST00000564563.1	PDPR-008	2381	37aa	ENSP00000456385.1	Nonsense mediated decay		H3BRS5	-	-
ENST00000562100.1	PDPR-006	1643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561920.1	PDPR-002	2194	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 0, Transcript length: 1,643 bps,

Version

ENST00000562100.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434507 (version 1)

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Transcript: ENST00000562100.1 PDPR-006

Summary