Transcript: ENST00000588645.1 ICAM1-004

Description

intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:5344]

Gene Synonyms

BB2, CD54, P3.58

Location

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 6324 variant alleles and maps to 163 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264832.3	ICAM1-001	3252	532aa	ENSP00000264832.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12231	B4DNT6 P05362	NM_000201.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423829.2	ICAM1-002	1296	310aa	ENSP00000413124.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESS4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588645.1	ICAM1-004	581	180aa	ENSP00000465680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKL8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585443.1	ICAM1-005	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592686.1	ICAM1-006	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 581 bps, Translation length: 180 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000588645.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451209 (version 1)