Transcript: ENST00000609154.1 CRLS1-006

Description

cardiolipin synthase 1 [Source:HGNC Symbol;Acc:16148]

Gene Synonyms

C20orf155, CLS, CLS1, GCD10, dJ967N21.6

Location

Chromosome 20: 5,987,902-5,996,701 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3746 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSG00000088766.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378863.4	CRLS1-001	3958	301aa	ENSP00000368140.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13096	Q9UJA2	NM_019095.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452938.1	CRLS1-201	1150	205aa	ENSP00000416770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NTG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378868.4	CRLS1-005	994	202aa	ENSP00000368145.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46578	Q9UJA2	NM_001127458.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464921.1	CRLS1-004	702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478846.1	CRLS1-003	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489345.1	CRLS1-002	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609154.1	CRLS1-006	977	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 977 bps,

Version

ENST00000609154.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000471916 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000609154.1 CRLS1-006

Summary