Transcript: ENST00000378868.4 CRLS1-005

Description

cardiolipin synthase 1 [Source:HGNC Symbol;Acc:16148]

Gene Synonyms

C20orf155, CLS, CLS1, GCD10, dJ967N21.6

Location

Chromosome 20: 5,987,898-6,018,039 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 12250 variant alleles and maps to 267 oligo probes.

Gene

This transcript is a product of gene ENSG00000088766.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378863.4	CRLS1-001	3958	301aa	ENSP00000368140.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13096	Q9UJA2	NM_019095.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452938.1	CRLS1-201	1150	205aa	ENSP00000416770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NTG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378868.4	CRLS1-005	994	202aa	ENSP00000368145.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46578	Q9UJA2	NM_001127458.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464921.1	CRLS1-004	702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478846.1	CRLS1-003	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489345.1	CRLS1-002	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609154.1	CRLS1-006	977	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 994 bps, Translation length: 202 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UJA2

CCDS

This transcript is a member of the Human CCDS set: CCDS46578

Version

ENST00000378868.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000471915 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000378868.4 CRLS1-005

Summary