Transcript: ENST00000562150.1 OGFOD1-011

Description

2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:25585]

Gene Synonyms

FLJ10826, KIAA1612, TPA1

Location

Chromosome 16: 56,485,433-56,500,115 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 6200 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSG00000087263.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000566157.1	OGFOD1-001	4647	542aa	ENSP00000457258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10761	H3BP48 H3BUA6 Q8N543	NM_018233.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568397.1	OGFOD1-003	1681	499aa	ENSP00000457746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP48 H3BUQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562150.1	OGFOD1-011	586	164aa	ENSP00000456111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP48 H3BR79	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561646.1	OGFOD1-009	584	175aa	ENSP00000457553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP48 H3BUA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000336111.5	OGFOD1-002	2415	39aa	ENSP00000337196.5	Nonsense mediated decay		J3KNR5	-	-
ENST00000565682.1	OGFOD1-010	567	109aa	ENSP00000456016.1	Nonsense mediated decay		H3BR02	-	-
ENST00000569802.1	OGFOD1-007	474	46aa	ENSP00000455149.1	Nonsense mediated decay		H3BP48	-	-
ENST00000565209.1	OGFOD1-006	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568172.1	OGFOD1-008	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563733.1	OGFOD1-005	734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569645.1	OGFOD1-004	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 586 bps, Translation length: 164 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000562150.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434747 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000562150.1 OGFOD1-011

Summary