Transcript: ENST00000570308.1 MMP2-008

Description

matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) [Source:HGNC Symbol;Acc:7166]

Gene Synonyms

CLG4, CLG4A, MMP-II, MONA, TBE-1

Location

Chromosome 16: 55,423,612-55,540,149 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 53 domains and features, is associated with 53804 variant alleles and maps to 640 oligo probes.

Gene

This transcript is a product of gene ENSG00000087245.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000219070.4	MMP2-001	3741	660aa	ENSP00000219070.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10752	H3BR66 H3BV48 P08253 Q2EF79	NM_004530.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570308.1	MMP2-008	3235	584aa	ENSP00000461421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR66 H3BV48 P08253 Q2EF79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437642.2	MMP2-003	2469	610aa	ENSP00000394237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45487	H3BR66 H3BV48 P08253 Q2EF79	NM_001127891.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543485.1	MMP2-002	1978	584aa	ENSP00000444143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR66 H3BV48 P08253 Q2EF79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570283.1	MMP2-006	755	251aa	ENSP00000456518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BS34	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564864.1	MMP2-004	736	201aa	ENSP00000456096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR66 H3BV48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568715.1	MMP2-007	566	118aa	ENSP00000457949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BV48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566564.1	MMP2-005	443	22aa	ENSP00000461915.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 3,235 bps, Translation length: 584 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08253

Version

ENST00000570308.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000440029 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000570308.1 MMP2-008

Summary