Transcript: ENST00000407008.3 NLK-001

Description

nemo-like kinase [Source:HGNC Symbol;Acc:29858]

Gene Synonyms

LAK1

Location

Chromosome 17: 26,369,182-26,523,407 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 60014 variant alleles and maps to 684 oligo probes.

Gene

This transcript is a product of gene ENSG00000087095.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407008.3	NLK-001	4047	527aa	ENSP00000384625.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11224	H0YD75 Q9UBE8	NM_016231.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582037.1	NLK-004	1501	181aa	ENSP00000464656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSE9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496808.1	NLK-002	1702	475aa	ENSP00000433117.1	Nonsense mediated decay		H0YD75	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000583517.1	NLK-003	695	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584188.1	NLK-005	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584878.1	NLK-006	777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 4,047 bps, Translation length: 527 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBE8

CCDS

This transcript is a member of the Human CCDS set: CCDS11224

Version

ENST00000407008.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255607 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000407008.3 NLK-001

Summary