Transcript: ENST00000377894.2 TDRD3-001

Description

tudor domain containing 3 [Source:HGNC Symbol;Acc:20612]

Gene Synonyms

FLJ21007

Location

Chromosome 13: 60,971,122-61,148,011 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 13 domains and features, is associated with 70888 variant alleles and maps to 548 oligo probes.

Gene

This transcript is a product of gene ENSG00000083544.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000535286.1	TDRD3-202	2579	744aa	ENSP00000440190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53872	B1AMN9 Q9H7E2	NM_001146070.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000196169.3	TDRD3-201	3019	651aa	ENSP00000196169.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9441	B1AMN9 Q9H7E2	NM_030794.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377881.2	TDRD3-003	2532	651aa	ENSP00000367113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9441	B1AMN9 Q9H7E2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377894.2	TDRD3-001	2484	651aa	ENSP00000367126.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9441	B1AMN9 Q9H7E2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377882.3	TDRD3-005	660	129aa	ENSP00000367114.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484389.2	TDRD3-002	1863	116aa	ENSP00000432703.1	Nonsense mediated decay		F2Z2Y2	-	-
ENST00000463109.1	TDRD3-004	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471710.1	TDRD3-006	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 10, Transcript length: 2,484 bps, Translation length: 651 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H7E2

CCDS

This transcript is a member of the Human CCDS set: CCDS9441

Version

ENST00000377894.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045173 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000377894.2 TDRD3-001

Summary