Transcript: ENST00000375963.3 ZCCHC6-001

Description

zinc finger, CCHC domain containing 6 [Source:HGNC Symbol;Acc:25817]

Gene Synonyms

FLJ13409, HS2, KIAA1711, PAPD6, TUT7

Location

Chromosome 9: 88,902,874-88,969,327 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 34 domains and features, is associated with 26349 variant alleles and maps to 819 oligo probes.

Gene

This transcript is a product of gene ENSG00000083223.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375963.3	ZCCHC6-001	5379	1495aa	ENSP00000365130.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35057	Q5VYS8	NM_024617.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277141.6	ZCCHC6-003	5724	784aa	ENSP00000277141.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375961.2	ZCCHC6-201	5533	1457aa	ENSP00000365128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VYS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375960.2	ZCCHC6-004	4939	1259aa	ENSP00000365127.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55323	Q5VYS8	NM_001185074.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375957.1	ZCCHC6-002	2262	395aa	ENSP00000365124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VYS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375948.1	ZCCHC6-005	958	124aa	ENSP00000365115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VYT0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375947.1	ZCCHC6-006	611	168aa	ENSP00000365114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VYS9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469004.1	ZCCHC6-007	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 5,379 bps, Translation length: 1,495 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VYS8

CCDS

This transcript is a member of the Human CCDS set: CCDS35057

Version

ENST00000375963.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052918 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000375963.3 ZCCHC6-001

Summary