Transcript: ENST00000336184.2 TRAF5-201

Description

TNF receptor-associated factor 5 [Source:HGNC Symbol;Acc:12035]

Gene Synonyms

MGC:39780, RNF84

Location

Chromosome 1: 211,499,957-211,548,282 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 23 domains and features, is associated with 19176 variant alleles and maps to 511 oligo probes.

Gene

This transcript is a product of gene ENSG00000082512.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261464.5	TRAF5-001	3972	557aa	ENSP00000261464.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1497	B3KX26 B4E0A2 D3DT93 O00463	NM_001033910.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336184.2	TRAF5-201	3972	557aa	ENSP00000336825.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1497	B3KX26 B4E0A2 D3DT93 O00463	NM_004619.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367004.3	TRAF5-006	1827	557aa	ENSP00000355971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1497	B3KX26 B4E0A2 D3DT93 O00463	NM_145759.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427925.2	TRAF5-202	1622	451aa	ENSP00000389891.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KX26 F5H1P7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462410.1	TRAF5-002	4958	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473385.1	TRAF5-003	3491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488428.1	TRAF5-004	905	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494355.1	TRAF5-005	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,972 bps, Translation length: 557 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00463

CCDS

This transcript is a member of the Human CCDS set: CCDS1497

Version

ENST00000336184.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000089830 (version 1) OTTHUMT00000089825 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000336184.2 TRAF5-201

Summary