Transcript: ENST00000382927.3 ME2-002

Description

malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:HGNC Symbol;Acc:6984]

Gene Synonyms

ODS1

Location

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 28790 variant alleles and maps to 532 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000321341.5	ME2-001	3164	584aa	ENSP00000321070.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11948	P23368	NM_002396.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382927.3	ME2-002	2492	479aa	ENSP00000372384.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54187	P23368	NM_001168335.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585680.1	ME2-004	670	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589330.1	ME2-003	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591925.1	ME2-005	395	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,492 bps, Translation length: 479 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23368

CCDS

This transcript is a member of the Human CCDS set: CCDS54187

Version

ENST00000382927.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000449552 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.