Transcript: ENST00000323011.3 CDH7-002

Description

cadherin 7, type 2 [Source:HGNC Symbol;Acc:1766]

Gene Synonyms

CDH7L1

Location

About this transcript

This transcript has 12 exons, is annotated with 45 domains and features, is associated with 62835 variant alleles and maps to 420 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397968.2	CDH7-001	3292	785aa	ENSP00000381058.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11993	Q9ULB5	NM_004361.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536984.2	CDH7-003	3766	630aa	ENSP00000443030.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5X9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323011.3	CDH7-002	2728	785aa	ENSP00000319166.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11993	Q9ULB5	NM_033646.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581601.1	CDH7-004	741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,728 bps, Translation length: 785 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ULB5

CCDS

This transcript is a member of the Human CCDS set: CCDS11993

Version

ENST00000323011.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000442207 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.