Transcript: ENST00000296031.4 CXCL2-003

Description

chemokine (C-X-C motif) ligand 2 [Source:HGNC Symbol;Acc:4603]

Gene Synonyms

CINC-2a, GRO2, GROB, GROb, MGSA-b, MIP-2a, MIP2, MIP2A, SCYB2

Location

About this transcript

This transcript has 3 exons, is associated with 873 variant alleles and maps to 360 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508487.2	CXCL2-001	1218	107aa	ENSP00000427279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34008	P19875 Q6LD33	NM_002089.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296031.4	CXCL2-003	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510048.1	CXCL2-002	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 577 bps,

Version

ENST00000296031.4

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362733 (version 1)