Transcript: ENST00000513674.1 CPOX-003

Description

coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:2321]

Gene Synonyms

CPO, CPX, HCP

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 2072 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264193.2	CPOX-001	2825	454aa	ENSP00000264193.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2932	P36551	NM_000097.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513674.1	CPOX-003	826	175aa	ENSP00000424924.1	Nonsense mediated decay		D6RER6	-	-
ENST00000512905.1	CPOX-005	593	70aa	ENSP00000425880.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000515041.1	CPOX-002	1030	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510489.1	CPOX-004	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 826 bps, Translation length: 175 residues

Version

ENST00000513674.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358902 (version 1)

Annotation Attributes

low sequence quality [Definitions]