Transcript: ENST00000483392.2 DCT-003

Description

dopachrome tautomerase [Source:HGNC Symbol;Acc:2709]

Gene Synonyms

TRP-2, TYRP2

Location

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 12564 variant alleles and maps to 556 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000446125.1	DCT-201	2395	552aa	ENSP00000392762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45060	P40126 Q0PK43 Q9NQD8	NM_001129889.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377028.5	DCT-001	4568	519aa	ENSP00000366227.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9470	P40126 Q0PK43 Q9NQD8	NM_001922.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483392.2	DCT-003	1548	233aa	ENSP00000431275.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000490854.1	DCT-004	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472871.1	DCT-002	3540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,548 bps, Translation length: 233 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000483392.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000045463 (version 5)