Transcript: ENST00000179259.4 C12orf5-001

Description

chromosome 12 open reading frame 5 [Source:HGNC Symbol;Acc:1185]

Gene Synonyms

FR2BP, TIGAR

Location

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 14365 variant alleles and maps to 298 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000179259.4	C12orf5-001	1361	270aa	ENSP00000179259.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8525	Q9NQ88	NM_020375.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537251.1	C12orf5-003	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539671.1	C12orf5-002	160	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,361 bps, Translation length: 270 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQ88

CCDS

This transcript is a member of the Human CCDS set: CCDS8525

Version

ENST00000179259.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000398290 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.