Transcript: ENST00000510719.1 UBE2K-007

Description

ubiquitin-conjugating enzyme E2K [Source:HGNC Symbol;Acc:4914]

Gene Synonyms

E2-25K, HIP2, HYPG, LIG, UBC1

Location

Chromosome 4: 39,699,948-39,780,253 forward strand.

About this transcript

This transcript has 4 exons, is associated with 39125 variant alleles and maps to 250 oligo probes.

Gene

This transcript is a product of gene ENSG00000078140.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261427.5	UBE2K-001	5245	200aa	ENSP00000261427.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33976	B3KSH4 P61086	NM_005339.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445950.2	UBE2K-006	2175	157aa	ENSP00000390483.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47043	P61086	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295963.6	UBE2K-201	1223	139aa	ENSP00000295963.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIZ2 D6RDM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503368.1	UBE2K-005	891	149aa	ENSP00000421203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47044	B3KSH4 P61086	NM_001111113.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510934.1	UBE2K-004	589	123aa	ENSP00000425301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510719.1	UBE2K-007	566	44aa	ENSP00000421422.1	Nonsense mediated decay		D6RFX1	-	-
ENST00000438068.2	UBE2K-002	2262	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513231.1	UBE2K-003	871	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 566 bps, Translation length: 44 residues

Version

ENST00000510719.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361067 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000510719.1 UBE2K-007

Summary