Transcript: ENST00000491074.1 DNAJC10-002

Description

DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:HGNC Symbol;Acc:24637]

Gene Synonyms

ERDJ5, ERdj5, JPDI, MTHr, PDIA19

Location

Chromosome 2: 183,581,023-183,642,191 forward strand.

About this transcript

This transcript has 25 exons, is associated with 28474 variant alleles and maps to 840 oligo probes.

Gene

This transcript is a product of gene ENSG00000077232.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264065.7	DNAJC10-001	20129	793aa	ENSP00000264065.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33345	Q8IXB1 Q8N4C5	NM_018981.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537515.1	DNAJC10-201	1669	332aa	ENSP00000441560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1G0 Q3B7W8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418559.1	DNAJC10-003	2988	275aa	ENSP00000389483.1	Nonsense mediated decay		E7EP04	-	-
ENST00000444005.1	DNAJC10-007	605	121aa	ENSP00000400096.1	Nonsense mediated decay		H7C1G0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469118.1	DNAJC10-004	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491074.1	DNAJC10-002	3962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494462.1	DNAJC10-005	673	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459930.1	DNAJC10-006	424	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 0, Transcript length: 3,962 bps,

Version

ENST00000491074.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334419 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000491074.1 DNAJC10-002

Summary