Transcript: ENST00000485601.1 ACTL6B-004

Description

actin-like 6B [Source:HGNC Symbol;Acc:160]

Gene Synonyms

ACTL6, BAF53B

Location

Chromosome 7: 100,245,851-100,254,058 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 4005 variant alleles and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSG00000077080.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000160382.5	ACTL6B-001	1537	426aa	ENSP00000160382.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5702	C9JQT4 O94805	NM_016188.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461605.1	ACTL6B-002	444	66aa	ENSP00000420151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485601.1	ACTL6B-004	1078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487125.1	ACTL6B-006	947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487225.1	ACTL6B-003	790	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489904.1	ACTL6B-005	309	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,078 bps,

Version

ENST00000485601.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356748 (version 1)

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Transcript: ENST00000485601.1 ACTL6B-004

Summary