Transcript: ENST00000431660.1 SRI-003

Description

sorcin [Source:HGNC Symbol;Acc:11292]

Gene Synonyms

CP-22, CP22, SCN, V19

Location

Chromosome 7: 87,836,991-87,856,291 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 7932 variant alleles and maps to 271 oligo probes.

Gene

This transcript is a product of gene ENSG00000075142.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265729.2	SRI-001	2010	198aa	ENSP00000265729.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5612	P30626 Q75MZ6	NM_003130.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431660.1	SRI-003	1418	180aa	ENSP00000391148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59063	B4DKK2	NM_001256892.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419179.1	SRI-005	1307	158aa	ENSP00000397609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DHQ6 Q75MZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394641.3	SRI-012	653	183aa	ENSP00000378137.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47638	P30626	NM_198901.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490437.1	SRI-004	570	155aa	ENSP00000418512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457606.1	SRI-007	769	72aa	ENSP00000415271.1	Nonsense mediated decay		E9PG82 Q75MZ6	-	-
ENST00000486860.1	SRI-002	1024	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472930.2	SRI-011	903	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488015.1	SRI-009	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489079.1	SRI-008	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,418 bps, Translation length: 180 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS59063

Version

ENST00000431660.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335020 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000431660.1 SRI-003

Summary