Transcript: ENST00000547980.1 NTN4-005

Description

netrin 4 [Source:HGNC Symbol;Acc:13658]

Gene Synonyms

PRO3091

Location

Chromosome 12: 96,131,867-96,183,726 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 21209 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSG00000074527.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343702.4	NTN4-001	3615	628aa	ENSP00000340998.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9054	F8W0I7 Q9HB63	NM_021229.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344911.4	NTN4-003	3152	591aa	ENSP00000339436.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0I7 Q9HB63	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538383.1	NTN4-002	1971	591aa	ENSP00000444432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0I7 Q9HB63	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553059.1	NTN4-004	1818	605aa	ENSP00000447292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0I7 Q9HB63	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547980.1	NTN4-005	749	176aa	ENSP00000447594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0I7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552603.1	NTN4-007	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550074.1	NTN4-006	287	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 749 bps, Translation length: 176 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000547980.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408378 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000547980.1 NTN4-005

Summary