Transcript: ENST00000200557.6 ADAM11-001

Description

ADAM metallopeptidase domain 11 [Source:HGNC Symbol;Acc:189]

Gene Synonyms

MDC

Location

About this transcript

This transcript has 27 exons, is annotated with 26 domains and features, is associated with 10957 variant alleles and maps to 810 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000200557.6	ADAM11-001	4571	769aa	ENSP00000200557.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11486	O75078	NM_002390.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535346.1	ADAM11-004	2529	569aa	ENSP00000443773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355638.4	ADAM11-002	4220	241aa	ENSP00000347856.4	Nonsense mediated decay		H7BY08	-	-
ENST00000587773.1	ADAM11-005	2858	517aa	ENSP00000465537.1	Nonsense mediated decay		K7EKA8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588363.1	ADAM11-006	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 4,571 bps, Translation length: 769 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75078

CCDS

This transcript is a member of the Human CCDS set: CCDS11486

Version

ENST00000200557.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000444531 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.