Transcript: ENST00000473069.1 RAD18-004

Description

RAD18 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18278]

Gene Synonyms

RNF73

Location

Chromosome 3: 8,923,104-8,954,153 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 12990 variant alleles and maps to 198 oligo probes.

Gene

This transcript is a product of gene ENSG00000070950.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264926.2	RAD18-001	5886	495aa	ENSP00000264926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2571	C9J0Q4 H7C0A5 Q9NS91	NM_020165.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413832.1	RAD18-007	581	91aa	ENSP00000412261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0Q4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427329.1	RAD18-008	557	131aa	ENSP00000412054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0A5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429790.1	RAD18-003	516	79aa	ENSP00000393783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0A5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000415439.1	RAD18-002	1550	310aa	ENSP00000402049.1	Nonsense mediated decay		C9J0Q4 F8WE49	-	-
ENST00000421052.1	RAD18-009	582	126aa	ENSP00000399620.1	Nonsense mediated decay		F8WFA6	-	-
ENST00000418463.1	RAD18-010	563	53aa	ENSP00000397852.1	Nonsense mediated decay		F8WAZ7	-	-
ENST00000495087.1	RAD18-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469793.1	RAD18-005	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473069.1	RAD18-004	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 556 bps,

Version

ENST00000473069.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318501 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000473069.1 RAD18-004

Summary