Transcript: ENST00000262415.3 DHX8-001

Description

DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:HGNC Symbol;Acc:2749]

Gene Synonyms

DDX8, HRH1, PRP22, PRPF22

Location

Chromosome 17: 41,561,334-41,603,038 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 26 domains and features, is associated with 17954 variant alleles and maps to 765 oligo probes.

Gene

This transcript is a product of gene ENSG00000067596.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262415.3	DHX8-001	5558	1220aa	ENSP00000262415.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11464	Q14562	NM_004941.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540306.1	DHX8-002	3809	1181aa	ENSP00000437886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H658	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589898.1	DHX8-006	739	138aa	ENSP00000466900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7END7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587574.1	DHX8-004	492	33aa	ENSP00000465178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000605777.1	DHX8-007	235	78aa	ENSP00000474654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3S0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000592258.1	DHX8-005	590	53aa	ENSP00000467834.1	Nonsense mediated decay		K7EQH7	-	-
ENST00000587044.1	DHX8-003	6215	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 5,558 bps, Translation length: 1,220 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14562

CCDS

This transcript is a member of the Human CCDS set: CCDS11464

Version

ENST00000262415.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000453485 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000262415.3 DHX8-001

Summary