Transcript: ENST00000376785.2 ZNRD1-006

Description

zinc ribbon domain containing 1 [Source:HGNC Symbol;Acc:13182]

Gene Synonyms

HTEX-6, RPA12, Rpa12, TEX6, ZR14, hZR14, tctex-6

Location

Chromosome 6: 30,029,040-30,032,686 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 1511 variant alleles and maps to 1054 oligo probes.

Gene

This transcript is a product of gene ENSG00000066379.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000332435.5	ZNRD1-002	864	126aa	ENSP00000331111.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4670	Q2L6J2 Q9P1U0	NM_170783.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376785.2	ZNRD1-006	754	126aa	ENSP00000365981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4670	Q2L6J2 Q9P1U0	NM_001278786.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359374.4	ZNRD1-001	743	126aa	ENSP00000352333.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4670	Q2L6J2 Q9P1U0	NM_014596.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376782.2	ZNRD1-005	736	126aa	ENSP00000365978.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4670	Q2L6J2 Q9P1U0	NM_001278785.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463141.1	ZNRD1-004	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471008.1	ZNRD1-003	3672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 754 bps, Translation length: 126 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P1U0

CCDS

This transcript is a member of the Human CCDS set: CCDS4670

Version

ENST00000376785.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000253193 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000376785.2 ZNRD1-006

Summary