Transcript: ENST00000514375.1 SLC9A3-003

Description

solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 [Source:HGNC Symbol;Acc:11073]

Gene Synonyms

NHE3

Location

About this transcript

This transcript has 17 exons, is annotated with 38 domains and features, is associated with 29529 variant alleles and maps to 518 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264938.3	SLC9A3-001	2584	834aa	ENSP00000264938.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3855	P48764	NM_004174.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514375.1	SLC9A3-003	2504	825aa	ENSP00000422983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64116	E9PF67	NM_001284351.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507407.1	SLC9A3-004	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,504 bps, Translation length: 825 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS64116

Version

ENST00000514375.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367610 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.