Transcript: ENST00000596459.1 ELAVL1-002

Description

ELAV like RNA binding protein 1 [Source:HGNC Symbol;Acc:3312]

Gene Synonyms

ELAV1, HUR, Hua, MelG

Location

Chromosome 19: 8,028,043-8,067,087 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features, is associated with 17530 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSG00000066044.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407627.2	ELAVL1-001	6015	326aa	ENSP00000385269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12193	Q15717	NM_001419.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596459.1	ELAVL1-002	1473	326aa	ENSP00000472197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12193	Q15717	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351593.5	ELAVL1-201	1473	353aa	ENSP00000264073.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DVB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596154.1	ELAVL1-004	880	133aa	ENSP00000471011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R055	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593807.1	ELAVL1-005	856	153aa	ENSP00000470727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZR9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595499.1	ELAVL1-006	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,473 bps, Translation length: 326 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15717

CCDS

This transcript is a member of the Human CCDS set: CCDS12193

Version

ENST00000596459.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000461495 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000596459.1 ELAVL1-002

Summary