Transcript: ENST00000536681.3 FAR2-001

Description

fatty acyl CoA reductase 2 [Source:HGNC Symbol;Acc:25531]

Gene Synonyms

FLJ10462, MLSTD1, SDR10E2

Location

Chromosome 12: 29,302,133-29,488,549 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 78133 variant alleles and maps to 500 oligo probes.

Gene

This transcript is a product of gene ENSG00000064763.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000536681.3	FAR2-001	3616	515aa	ENSP00000443291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8717	F8VPF2 F8VV73 Q96K12	NM_001271783.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000182377.4	FAR2-002	2095	515aa	ENSP00000182377.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8717	F8VPF2 F8VV73 Q96K12	NM_018099.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547116.1	FAR2-003	1787	418aa	ENSP00000449349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61084	F8VPF2 F8VV73	NM_001271784.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547759.1	FAR2-010	545	22aa	ENSP00000447467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551451.1	FAR2-004	539	44aa	ENSP00000450117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VPF2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551193.1	FAR2-009	425	85aa	ENSP00000449187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YIE0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000552137.1	FAR2-007	803	67aa	ENSP00000449436.1	Nonsense mediated decay		F8VX60	-	-
ENST00000549080.1	FAR2-006	871	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550541.1	FAR2-005	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547411.1	FAR2-008	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,616 bps, Translation length: 515 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96K12

CCDS

This transcript is a member of the Human CCDS set: CCDS8717

Version

ENST00000536681.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000403479 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000536681.3 FAR2-001

Summary