Transcript: ENST00000315588.5 MED29-001

Description

mediator complex subunit 29 [Source:HGNC Symbol;Acc:23074]

Gene Synonyms

DKFZp434H247, IXL

Location

Chromosome 19: 39,881,951-39,891,277 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 4905 variant alleles and maps to 465 oligo probes.

Gene

This transcript is a product of gene ENSG00000063322.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315588.5	MED29-001	3653	221aa	ENSP00000314343.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33021	B4DGM4 B4DN56 B4DUA7	NM_017592.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599213.2	MED29-011	2490	200aa	ENSP00000471802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DGM4 B4DN56 Q9NX70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594368.1	MED29-002	1471	196aa	ENSP00000472501.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNQ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596297.1	MED29-007	636	208aa	ENSP00000473181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R3F3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599417.1	MED29-005	2941	96aa	ENSP00000471101.1	Nonsense mediated decay		M0R0A0	-	-
ENST00000600973.1	MED29-009	546	114aa	ENSP00000471444.2	Nonsense mediated decay		M0R0U2	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,653 bps, Translation length: 221 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33021

Version

ENST00000315588.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000464486 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000315588.5 MED29-001

Summary