Description
citrate synthase [Source:HGNC Symbol;Acc:2422]
Location
Chromosome 12: 56,666,980-56,679,875 reverse strand.
About this transcript
This transcript has 8 exons, is associated with 5857 variant alleles and maps to 369 oligo probes.
Gene
This transcript is a product of gene ENSG00000062485.14 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000351328.3 | CS-001 | 2975 | 466aa | ENSP00000342056.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8913 | F8VPA1 F8VPF9 F8VRP1 F8VX07 F8VX68 F8VZK9 F8W4S1 F8W642 O75390 Q0QEL2 | NM_004077.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000548567.1 | CS-002 | 3057 | 400aa | ENSP00000446779.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VPA1 F8VPF9 F8VRP1 F8VX07 F8VX68 F8VZK9 F8W642 O75390 Q0QEL2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000542324.2 | CS-003 | 1893 | 453aa | ENSP00000440543.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DJV2 F8VPA1 F8VPF9 F8VRP1 F8VX07 F8VX68 F8VZK9 F8W642 Q0QEL2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000551137.1 | CS-009 | 903 | 114aa | ENSP00000449753.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VX07 F8VZK9 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551473.1 | CS-011 | 797 | 120aa | ENSP00000449427.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VRP1 F8VX07 F8VX68 F8VZK9 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551430.2 | CS-010 | 751 | 66aa | ENSP00000448166.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550734.1 | CS-018 | 747 | 144aa | ENSP00000449025.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VPA1 F8VPF9 F8VRP1 F8VX07 F8VX68 F8VZK9 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551936.1 | CS-034 | 744 | 144aa | ENSP00000450312.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VPA1 F8VPF9 F8VRP1 F8VX07 F8VX68 F8VZK9 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551253.1 | CS-036 | 676 | 140aa | ENSP00000450101.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VPF9 F8VRP1 F8VX07 F8VX68 F8VZK9 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547298.1 | CS-035 | 656 | 117aa | ENSP00000448409.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VRP1 F8VX07 F8VZK9 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550159.1 | CS-029 | 646 | 80aa | ENSP00000447346.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZK9 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550655.1 | CS-013 | 589 | 178aa | ENSP00000448172.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZK9 F8W4S1 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552688.1 | CS-030 | 580 | 157aa | ENSP00000447442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W1S4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546930.1 | CS-032 | 568 | 146aa | ENSP00000450403.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR34 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548041.1 | CS-033 | 561 | 149aa | ENSP00000447986.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VTT8 F8W642 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549221.1 | CS-031 | 553 | 140aa | ENSP00000448667.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VRI6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548746.1 | CS-019 | 551 | 123aa | ENSP00000449080.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YIC4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000551968.1 | CS-027 | 542 | 142aa | ENSP00000447948.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VU34 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549143.1 | CS-008 | 2811 | 49aa | ENSP00000449571.1 | Nonsense mediated decay | F8VVY4 | - | - | |
| ENST00000548849.1 | CS-023 | 1028 | 132aa | ENSP00000449491.1 | Nonsense mediated decay | F8VWQ5 | - | - | |
| ENST00000546891.1 | CS-020 | 911 | 190aa | ENSP00000446492.1 | Nonsense mediated decay | F8VRP1 F8VX07 F8VX68 F8VZK9 F8W642 H0YH82 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000552222.1 | CS-024 | 555 | 75aa | ENSP00000447582.1 | Nonsense mediated decay | F8W0J2 | - | - | |
| ENST00000546585.1 | CS-006 | 1803 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546621.1 | CS-005 | 1513 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550996.1 | CS-012 | 718 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547912.1 | CS-022 | 674 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551441.1 | CS-014 | 636 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550700.1 | CS-015 | 559 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551155.1 | CS-017 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547283.1 | CS-028 | 555 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550044.1 | CS-016 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552331.1 | CS-021 | 526 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547449.1 | CS-026 | 434 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |