Transcript: ENST00000464950.2 YIPF1-001

Description

Yip1 domain family, member 1 [Source:HGNC Symbol;Acc:25231]

Gene Synonyms

DJ167A19.1, FinGER1

Location

Chromosome 1: 54,317,392-54,355,406 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 15101 variant alleles and maps to 523 oligo probes.

Gene

This transcript is a product of gene ENSG00000058799.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000072644.1	YIPF1-201	1803	306aa	ENSP00000072644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS584	Q9Y548	NM_018982.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371399.1	YIPF1-002	1503	123aa	ENSP00000360452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y548	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539954.1	YIPF1-202	1196	331aa	ENSP00000439926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z6F5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412288.1	YIPF1-003	1042	217aa	ENSP00000416507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFB2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464950.2	YIPF1-001	1602	306aa	ENSP00000432266.1	Nonsense mediated decay	CCDS584	Q9Y548	-	-
ENST00000469457.1	YIPF1-004	1009	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480151.1	YIPF1-005	940	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465897.1	YIPF1-006	808	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472983.1	YIPF1-007	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 8, Transcript length: 1,602 bps, Translation length: 306 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y548

CCDS

This transcript is a member of the Human CCDS set: CCDS584

Version

ENST00000464950.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000022103 (version 5)

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Transcript: ENST00000464950.2 YIPF1-001

Summary