Transcript: ENST00000534159.1 CHRDL2-004

Description

chordin-like 2 [Source:HGNC Symbol;Acc:24168]

Gene Synonyms

BNF1, CHL2, FKSG37

Location

Chromosome 11: 74,411,967-74,442,198 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 12432 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSG00000054938.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263671.5	CHRDL2-001	1712	451aa	ENSP00000263671.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8234	Q6WN34	NM_015424.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376332.3	CHRDL2-002	1867	429aa	ENSP00000365510.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60893	Q6WN34	NM_001278473.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528789.1	CHRDL2-003	1219	308aa	ENSP00000431380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6WN33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525413.1	CHRDL2-009	669	177aa	ENSP00000434257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529912.1	CHRDL2-010	344	91aa	ENSP00000432345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376324.3	CHRDL2-007	1665	142aa	ENSP00000365502.3	Nonsense mediated decay		A8MQ10	-	-
ENST00000534276.1	CHRDL2-005	1415	142aa	ENSP00000432055.1	Nonsense mediated decay		Q6WN34	-	-
ENST00000528471.1	CHRDL2-006	1321	93aa	ENSP00000434589.1	Nonsense mediated decay		Q6WN34	-	-
ENST00000534159.1	CHRDL2-004	1971	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,971 bps,

Version

ENST00000534159.1

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000385392 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000534159.1 CHRDL2-004

Summary