Transcript: ENST00000407381.3 TBC1D22A-002

Description

TBC1 domain family, member 22A [Source:HGNC Symbol;Acc:1309]

Gene Synonyms

C22orf4, HSC79E021

Location

Chromosome 22: 47,158,569-47,569,726 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 199238 variant alleles and maps to 492 oligo probes.

Gene

This transcript is a product of gene ENSG00000054611.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337137.4	TBC1D22A-001	3787	517aa	ENSP00000336724.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14078	B0QYI3 B9A6M3 Q8WUA7	NM_014346.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406733.1	TBC1D22A-006	2267	470aa	ENSP00000385634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63512	B0QYI3	NM_001284305.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407381.3	TBC1D22A-002	1949	458aa	ENSP00000384036.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYI1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355704.3	TBC1D22A-003	1886	439aa	ENSP00000347932.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63511	Q8WUA7	NM_001284303.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380995.1	TBC1D22A-201	1271	324aa	ENSP00000370383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8WUA7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441162.1	TBC1D22A-005	2636	324aa	ENSP00000406214.1	Nonsense mediated decay		Q8WUA7	-	-
ENST00000394449.2	TBC1D22A-004	2048	237aa	ENSP00000377964.2	Nonsense mediated decay		F8WDP1	-	-
ENST00000441936.1	TBC1D22A-008	590	58aa	ENSP00000398828.1	Nonsense mediated decay		F8WBF7	-	-
ENST00000472791.1	TBC1D22A-009	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496139.1	TBC1D22A-007	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486163.1	TBC1D22A-010	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,949 bps, Translation length: 458 residues

Version

ENST00000407381.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000317925 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000407381.3 TBC1D22A-002

Summary