Transcript: ENST00000373166.3 TRAPPC3-001

Description

trafficking protein particle complex 3 [Source:HGNC Symbol;Acc:19942]

Gene Synonyms

BET3

Location

Chromosome 1: 36,602,173-36,615,070 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 5814 variant alleles and maps to 375 oligo probes.

Gene

This transcript is a product of gene ENSG00000054116.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373166.3	TRAPPC3-001	1265	180aa	ENSP00000362261.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS404	O43617	NM_014408.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373162.1	TRAPPC3-004	1056	134aa	ENSP00000362256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59194	O43617	NM_001270896.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373163.1	TRAPPC3-005	951	134aa	ENSP00000362257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59194	O43617	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373159.1	TRAPPC3-003	590	118aa	ENSP00000362253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NKE1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462715.1	TRAPPC3-002	2428	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497251.1	TRAPPC3-006	715	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469757.1	TRAPPC3-007	221	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,265 bps, Translation length: 180 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43617

CCDS

This transcript is a member of the Human CCDS set: CCDS404

Version

ENST00000373166.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000020384 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000373166.3 TRAPPC3-001

Summary