Transcript: ENST00000335475.5 KCNQ1-002

Description

potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:HGNC Symbol;Acc:6294]

Gene Synonyms

ATFB1, ATFB3, JLNS1, KCNA8, KCNA9, KVLQT1, Kv1.9, Kv7.1, LQT, LQT1, RWS, SQT2, WRS

Location

Chromosome 11: 2,482,666-2,869,468 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 34 domains and features, is associated with 179941 variant alleles and maps to 639 oligo probes.

Gene

This transcript is a product of gene ENSG00000053918.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000155840.5	KCNQ1-001	3245	676aa	ENSP00000155840.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7736	A0FIK7 P51787 Q96AI9	NM_181798.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335475.5	KCNQ1-002	2159	549aa	ENSP00000334497.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0FIK8 P51787 Q14D14 Q96AI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496887.2	KCNQ1-005	582	193aa	ENSP00000434560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPZ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000380776.4	KCNQ1-006	229	74aa	ENSP00000370153.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W824	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526095.1	KCNQ1-007	1046	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000345015.4	KCNQ1-004	304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,159 bps, Translation length: 549 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51787

Version

ENST00000335475.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000027517 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000335475.5 KCNQ1-002

Summary