Transcript: ENST00000513250.1 CLPTM1L-006

Description

CLPTM1-like [Source:HGNC Symbol;Acc:24308]

Gene Synonyms

CRR9, FLJ14400

Location

Chromosome 5: 1,323,948-1,332,453 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 6062 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000049656.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320895.5	CLPTM1L-001	2500	538aa	ENSP00000313854.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3862	B3KY18 Q96KA5	NM_030782.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320927.6	CLPTM1L-201	2053	502aa	ENSP00000315196.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY18 G5E9Z2 Q96KA5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507807.1	CLPTM1L-008	1740	369aa	ENSP00000423321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY18 G5E9Z2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506641.1	CLPTM1L-010	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507195.1	CLPTM1L-007	628	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513250.1	CLPTM1L-006	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503042.1	CLPTM1L-009	3540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503534.1	CLPTM1L-011	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511268.2	CLPTM1L-014	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508765.1	CLPTM1L-005	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503151.1	CLPTM1L-015	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511786.1	CLPTM1L-003	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505914.1	CLPTM1L-013	519	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505605.1	CLPTM1L-012	386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515719.1	CLPTM1L-002	382	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512451.1	CLPTM1L-004	341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 567 bps,

Version

ENST00000513250.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365903 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000513250.1 CLPTM1L-006

Summary