Transcript: ENST00000320895.5 CLPTM1L-001

Description

CLPTM1-like [Source:HGNC Symbol;Acc:24308]

Gene Synonyms

CRR9, FLJ14400

Location

Chromosome 5: 1,317,859-1,345,214 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 11 domains and features, is associated with 17895 variant alleles and maps to 683 oligo probes.

Gene

This transcript is a product of gene ENSG00000049656.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320895.5	CLPTM1L-001	2500	538aa	ENSP00000313854.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3862	B3KY18 Q96KA5	NM_030782.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320927.6	CLPTM1L-201	2053	502aa	ENSP00000315196.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY18 G5E9Z2 Q96KA5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507807.1	CLPTM1L-008	1740	369aa	ENSP00000423321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY18 G5E9Z2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506641.1	CLPTM1L-010	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507195.1	CLPTM1L-007	628	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513250.1	CLPTM1L-006	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503042.1	CLPTM1L-009	3540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503534.1	CLPTM1L-011	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511268.2	CLPTM1L-014	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508765.1	CLPTM1L-005	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503151.1	CLPTM1L-015	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511786.1	CLPTM1L-003	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505914.1	CLPTM1L-013	519	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505605.1	CLPTM1L-012	386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515719.1	CLPTM1L-002	382	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512451.1	CLPTM1L-004	341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,500 bps, Translation length: 538 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96KA5

CCDS

This transcript is a member of the Human CCDS set: CCDS3862

Version

ENST00000320895.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253649 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000320895.5 CLPTM1L-001

Summary