Transcript: ENST00000602883.1 PER3-007

Description

period circadian clock 3 [Source:HGNC Symbol;Acc:8847]

Gene Synonyms

GIG13

Location

Chromosome 1: 7,847,382-7,848,630 forward strand.

About this transcript

This transcript has 1 exon, is associated with 615 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSG00000049246.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361923.2	PER3-002	6203	1201aa	ENSP00000355031.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS89	A2I2N5 B4DR65 P56645 Q8TAR6	NM_016831.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377532.3	PER3-001	6279	1210aa	ENSP00000366755.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P56645	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377541.1	PER3-003	1524	378aa	ENSP00000366764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TAR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602883.1	PER3-007	1249	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463106.1	PER3-006	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494684.1	PER3-004	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473653.1	PER3-005	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,249 bps,

Version

ENST00000602883.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467520 (version 1)

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Transcript: ENST00000602883.1 PER3-007

Summary