Transcript: ENST00000418175.1 GUCA1A-004

Description

guanylate cyclase activator 1A (retina) [Source:HGNC Symbol;Acc:4678]

Gene Synonyms

C6orf131, COD3, CORD14, GCAP, GCAP1, GUCA, GUCA1, dJ139D8.6

Location

Chromosome 6: 42,123,144-42,146,080 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 10492 variant alleles and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSG00000048545.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394237.1	GUCA1A-002	2233	201aa	ENSP00000377784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4864	A6PVH5 P43080	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000053469.4	GUCA1A-003	1874	201aa	ENSP00000053469.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4864	A6PVH5 P43080	NM_000409.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372958.1	GUCA1A-001	1575	201aa	ENSP00000362049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4864	A6PVH5 P43080	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541991.1	GUCA1A-201	1075	201aa	ENSP00000437476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4864	A6PVH5 P43080	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418175.1	GUCA1A-004	801	88aa	ENSP00000388438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVH5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 801 bps, Translation length: 88 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000418175.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316583 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000418175.1 GUCA1A-004

Summary