Transcript: ENST00000467125.1 GOPC-003

Description

golgi-associated PDZ and coiled-coil motif containing [Source:HGNC Symbol;Acc:17643]

Gene Synonyms

CAL, FIG, GOPC1, PIST, dJ94G16.2

Location

About this transcript

This transcript has 7 exons, is associated with 131260 variant alleles and maps to 295 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368498.2	GOPC-002	4450	462aa	ENSP00000357484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5117	Q9HD26	NM_020399.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535237.1	GOPC-201	4604	462aa	ENSP00000445690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1Y4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000052569.6	GOPC-001	4590	454aa	ENSP00000052569.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34523	Q9HD26	NM_001017408.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467125.1	GOPC-003	930	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 930 bps,

Version

ENST00000467125.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041978 (version 1)