Transcript: ENST00000303965.4 ARAP2-001

Description

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:16924]

Gene Synonyms

CENTD1, KIAA0580, PARX

Location

Chromosome 4: 36,067,620-36,246,131 reverse strand.

About this transcript

This transcript has 33 exons, is annotated with 47 domains and features, is associated with 78008 variant alleles and maps to 1034 oligo probes.

Gene

This transcript is a product of gene ENSG00000047365.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303965.4	ARAP2-001	7514	1704aa	ENSP00000302895.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3441	D6RAD6 Q8WZ64	NM_015230.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506189.1	ARAP2-004	631	47aa	ENSP00000422731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAD6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511416.1	ARAP2-005	396	50aa	ENSP00000423886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513032.2	ARAP2-009	2007	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503225.1	ARAP2-007	1969	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505837.1	ARAP2-008	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503904.1	ARAP2-006	213	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508066.1	ARAP2-002	3120	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512804.1	ARAP2-003	758	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 33, Coding exons: 32, Transcript length: 7,514 bps, Translation length: 1,704 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WZ64

CCDS

This transcript is a member of the Human CCDS set: CCDS3441

Version

ENST00000303965.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000215074 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000303965.4 ARAP2-001

Summary