Transcript: ENST00000417220.2 PARP3-002

Description

poly (ADP-ribose) polymerase family, member 3 [Source:HGNC Symbol;Acc:273]

Gene Synonyms

ADPRT3, ADPRTL2, ADPRTL3, ARTD3, IRT1, PADPRT-3, hPARP-3, pADPRT-3

Location

Chromosome 3: 51,976,361-51,982,878 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 3312 variant alleles and maps to 514 oligo probes.

Gene

This transcript is a product of gene ENSG00000041880.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398755.3	PARP3-001	2336	540aa	ENSP00000381740.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46839	C9J9C7 Q9Y6F1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417220.2	PARP3-002	2472	533aa	ENSP00000395951.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43097	C9J9C7 Q9Y6F1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431474.1	PARP3-201	2360	533aa	ENSP00000401511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43097	C9J9C7 Q9Y6F1	NM_005485.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498510.1	PARP3-005	1040	331aa	ENSP00000417625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9C7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471971.1	PARP3-003	2070	53aa	ENSP00000417396.1	Nonsense mediated decay		F8WAY7	-	-
ENST00000486510.1	PARP3-008	443	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470601.1	PARP3-007	940	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475782.1	PARP3-006	771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470749.1	PARP3-004	697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,472 bps, Translation length: 533 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6F1

CCDS

This transcript is a member of the Human CCDS set: CCDS43097

Version

ENST00000417220.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348612 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000417220.2 PARP3-002

Summary