Transcript: ENST00000538126.1 PHLPP2-002

Description

PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:29149]

Gene Synonyms

KIAA0931, PHLPPL

Location

Chromosome 16: 71,710,491-71,757,715 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 22990 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSG00000040199.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000568954.1	PHLPP2-001	8317	1323aa	ENSP00000457991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32479	Q6ZVD8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393524.2	PHLPP2-004	8467	1256aa	ENSP00000377159.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZVD8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356272.3	PHLPP2-201	7919	1323aa	ENSP00000348611.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32479	Q6ZVD8	NM_015020.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567016.1	PHLPP2-003	4812	1358aa	ENSP00000454519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMS5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360429.3	PHLPP2-202	2877	956aa	ENSP00000353610.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1T8 Q6ZVD8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540628.1	PHLPP2-203	2077	166aa	ENSP00000445781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1T8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568004.1	PHLPP2-005	3099	723aa	ENSP00000458660.1	Nonsense mediated decay		I3L187	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564884.1	PHLPP2-006	2077	319aa	ENSP00000456572.1	Nonsense mediated decay		G3V1T8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538126.1	PHLPP2-002	3485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574977.1	PHLPP2-009	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 3,485 bps,

Version

ENST00000538126.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000434142 (version 2)

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Transcript: ENST00000538126.1 PHLPP2-002

Summary